STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_018952Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family. (314 aa)    
Predicted Functional Partners:
CRG98_021701
Uncharacterized protein.
     
 0.606
CRG98_036284
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
   
 0.521
CRG98_011295
Fe2OG dioxygenase domain-containing protein.
  
     0.508
CRG98_010554
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.506
CRG98_004003
Fe2OG dioxygenase domain-containing protein.
  
     0.500
CRG98_025153
Fe2OG dioxygenase domain-containing protein.
  
     0.485
CRG98_036287
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
     0.476
CRG98_033365
Uncharacterized protein.
  
   
 0.445
CRG98_013019
Uncharacterized protein.
      
 0.426
CRG98_036289
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
  
   
 0.420
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.