Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_009189 | CRG98_013933 | A0A2I0KPK9 | A0A2I0KAS0 | RECA_2 domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.871 |
CRG98_009189 | CRG98_016634 | A0A2I0KPK9 | A0A2I0K362 | RECA_2 domain-containing protein. | ERCC4 domain-containing protein. | 0.873 |
CRG98_009189 | CRG98_018032 | A0A2I0KPK9 | A0A2I0K1E9 | RECA_2 domain-containing protein. | Uncharacterized protein. | 0.754 |
CRG98_009189 | CRG98_018437 | A0A2I0KPK9 | A0A2I0JXR1 | RECA_2 domain-containing protein. | AAA_23 domain-containing protein. | 0.794 |
CRG98_009189 | CRG98_018438 | A0A2I0KPK9 | A0A2I0JXQ6 | RECA_2 domain-containing protein. | Uncharacterized protein. | 0.794 |
CRG98_009189 | CRG98_018439 | A0A2I0KPK9 | A0A2I0JXR9 | RECA_2 domain-containing protein. | Zinc-hook domain-containing protein. | 0.794 |
CRG98_009189 | CRG98_018440 | A0A2I0KPK9 | A0A2I0JZ58 | RECA_2 domain-containing protein. | Uncharacterized protein. | 0.794 |
CRG98_009189 | CRG98_028443 | A0A2I0KPK9 | A0A2I0J616 | RECA_2 domain-containing protein. | Chlorophyll a-b binding protein, chloroplastic; The light-harvesting complex (LHC) functions as a light receptor, it captures and delivers excitation energy to photosystems with which it is closely associated; Belongs to the light-harvesting chlorophyll a/b-binding (LHC) protein family. | 0.858 |
CRG98_013933 | CRG98_009189 | A0A2I0KAS0 | A0A2I0KPK9 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | RECA_2 domain-containing protein. | 0.871 |
CRG98_013933 | CRG98_016634 | A0A2I0KAS0 | A0A2I0K362 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | ERCC4 domain-containing protein. | 0.850 |
CRG98_013933 | CRG98_018032 | A0A2I0KAS0 | A0A2I0K1E9 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Uncharacterized protein. | 0.702 |
CRG98_013933 | CRG98_018437 | A0A2I0KAS0 | A0A2I0JXR1 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | AAA_23 domain-containing protein. | 0.997 |
CRG98_013933 | CRG98_018438 | A0A2I0KAS0 | A0A2I0JXQ6 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Uncharacterized protein. | 0.997 |
CRG98_013933 | CRG98_018439 | A0A2I0KAS0 | A0A2I0JXR9 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Zinc-hook domain-containing protein. | 0.997 |
CRG98_013933 | CRG98_018440 | A0A2I0KAS0 | A0A2I0JZ58 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Uncharacterized protein. | 0.997 |
CRG98_013933 | CRG98_030670 | A0A2I0KAS0 | A0A2I0IY51 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Uncharacterized protein; Belongs to the RecA family. | 0.860 |
CRG98_016634 | CRG98_009189 | A0A2I0K362 | A0A2I0KPK9 | ERCC4 domain-containing protein. | RECA_2 domain-containing protein. | 0.873 |
CRG98_016634 | CRG98_013933 | A0A2I0K362 | A0A2I0KAS0 | ERCC4 domain-containing protein. | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | 0.850 |
CRG98_016634 | CRG98_018032 | A0A2I0K362 | A0A2I0K1E9 | ERCC4 domain-containing protein. | Uncharacterized protein. | 0.708 |
CRG98_016634 | CRG98_018437 | A0A2I0K362 | A0A2I0JXR1 | ERCC4 domain-containing protein. | AAA_23 domain-containing protein. | 0.749 |
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