STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_017281Uncharacterized protein. (420 aa)    
Predicted Functional Partners:
CRG98_033828
Nuclear cap-binding protein subunit 2.
  
 0.930
CRG98_009832
RRM domain-containing protein.
  
 
 0.909
CRG98_038626
Cellulose synthase; Belongs to the glycosyltransferase 2 family. Plant cellulose synthase subfamily.
    
 0.876
CRG98_038625
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
    
 0.876
CRG98_030827
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.876
CRG98_010544
Uncharacterized protein; Belongs to the eukaryotic initiation factor 4E family.
    
 0.876
CRG98_044279
LsmAD domain-containing protein.
   
 
 0.855
CRG98_045768
RRM domain-containing protein.
   
  0.816
CRG98_004315
MI domain-containing protein.
   
 0.809
CRG98_004314
MIF4G domain-containing protein.
   
 0.809
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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