CRG98_017236 protein (Punica granatum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

CRG98_017236

Uncharacterized protein. (100 aa)

Predicted Functional Partners:

CRG98_030258

0.651

CRG98_013040

0.581

CRG98_014706

0.529

CRG98_000892

0.518

CRG98_026658

0.483

CRG98_031853

0.465

CRG98_000264

0.460

CRG98_011013

0.441

CRG98_007104

0.436

CRG98_005717

0.432

Your Current Organism:

Punica granatum

NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRG98_000264	CRG98_017236	A0A218Y2E8	A0A2I0K2S3	Uncharacterized protein.	Uncharacterized protein.	0.460
CRG98_000892	CRG98_011013	A0A2I0LDB6	A0A218X1G1	Uncharacterized protein.	Uncharacterized protein.	0.459
CRG98_000892	CRG98_017236	A0A2I0LDB6	A0A2I0K2S3	Uncharacterized protein.	Uncharacterized protein.	0.518
CRG98_000892	CRG98_031853	A0A2I0LDB6	A0A2I0IVQ3	Uncharacterized protein.	Rhomboid domain-containing protein.	0.467
CRG98_005717	CRG98_013040	A0A2I0KZE4	A0A218XZH2	Uncharacterized protein.	Uncharacterized protein.	0.595
CRG98_005717	CRG98_017236	A0A2I0KZE4	A0A2I0K2S3	Uncharacterized protein.	Uncharacterized protein.	0.432
CRG98_005717	CRG98_030258	A0A2I0KZE4	A0A218X3K9	Uncharacterized protein.	Uncharacterized protein.	0.403
CRG98_007104	CRG98_017236	A0A218VSZ1	A0A2I0K2S3	RNA_GG_bind domain-containing protein.	Uncharacterized protein.	0.436
CRG98_011013	CRG98_000892	A0A218X1G1	A0A2I0LDB6	Uncharacterized protein.	Uncharacterized protein.	0.459
CRG98_011013	CRG98_017236	A0A218X1G1	A0A2I0K2S3	Uncharacterized protein.	Uncharacterized protein.	0.441
CRG98_013040	CRG98_005717	A0A218XZH2	A0A2I0KZE4	Uncharacterized protein.	Uncharacterized protein.	0.595
CRG98_013040	CRG98_014706	A0A218XZH2	A0A2I0K9Q9	Uncharacterized protein.	Uncharacterized protein.	0.915
CRG98_013040	CRG98_017236	A0A218XZH2	A0A2I0K2S3	Uncharacterized protein.	Uncharacterized protein.	0.581
CRG98_013040	CRG98_030258	A0A218XZH2	A0A218X3K9	Uncharacterized protein.	Uncharacterized protein.	0.999
CRG98_014706	CRG98_013040	A0A2I0K9Q9	A0A218XZH2	Uncharacterized protein.	Uncharacterized protein.	0.915
CRG98_014706	CRG98_017236	A0A2I0K9Q9	A0A2I0K2S3	Uncharacterized protein.	Uncharacterized protein.	0.529
CRG98_014706	CRG98_030258	A0A2I0K9Q9	A0A218X3K9	Uncharacterized protein.	Uncharacterized protein.	0.972
CRG98_017236	CRG98_000264	A0A2I0K2S3	A0A218Y2E8	Uncharacterized protein.	Uncharacterized protein.	0.460
CRG98_017236	CRG98_000892	A0A2I0K2S3	A0A2I0LDB6	Uncharacterized protein.	Uncharacterized protein.	0.518
CRG98_017236	CRG98_005717	A0A2I0K2S3	A0A2I0KZE4	Uncharacterized protein.	Uncharacterized protein.	0.432