STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_015623Alpha-galactosidase. (244 aa)    
Predicted Functional Partners:
CRG98_048095
Uncharacterized protein; Belongs to the glycosyl hydrolase 31 family.
     
 0.826
CRG98_035630
Beta-galactosidase.
   
 
 0.809
CRG98_035420
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
     
 0.804
CRG98_013046
Bgal_small_N domain-containing protein.
     
 0.712
CRG98_013047
Glyco_hydro_2_N domain-containing protein.
     
 0.712
CRG98_039527
Uncharacterized protein.
     
 0.707
CRG98_039528
Uncharacterized protein.
     
 0.707
CRG98_021987
Uncharacterized protein.
     
 0.707
CRG98_000073
Uncharacterized protein.
     
 0.707
CRG98_049753
Glyco_hydro_20 domain-containing protein.
   
 
 0.701
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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