Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_004251 | CRG98_009737 | A0A2I0L3V1 | A0A218XIS8 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | S4 RNA-binding domain-containing protein. | 0.999 |
CRG98_004251 | CRG98_014271 | A0A2I0L3V1 | A0A2I0K9T9 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.997 |
CRG98_004251 | CRG98_015631 | A0A2I0L3V1 | A0A2I0K5Z2 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | G-patch domain-containing protein. | 0.913 |
CRG98_004251 | CRG98_015766 | A0A2I0L3V1 | A0A2I0K5G3 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Sas10 domain-containing protein. | 0.999 |
CRG98_004251 | CRG98_022243 | A0A2I0L3V1 | A0A218XLK7 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.997 |
CRG98_004251 | CRG98_023740 | A0A2I0L3V1 | A0A2I0JHX4 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | RNA helicase. | 0.945 |
CRG98_004251 | CRG98_035120 | A0A2I0L3V1 | A0A2I0IKF0 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | OB_NTP_bind domain-containing protein. | 0.935 |
CRG98_004251 | CRG98_035121 | A0A2I0L3V1 | A0A2I0IMA3 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.935 |
CRG98_004251 | CRG98_043055 | A0A2I0L3V1 | A0A2I0HY54 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | G-patch domain-containing protein. | 0.879 |
CRG98_004251 | CRG98_044833 | A0A2I0L3V1 | A0A2I0HU26 | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | Uncharacterized protein. | 0.999 |
CRG98_009737 | CRG98_004251 | A0A218XIS8 | A0A2I0L3V1 | S4 RNA-binding domain-containing protein. | KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. | 0.999 |
CRG98_009737 | CRG98_014271 | A0A218XIS8 | A0A2I0K9T9 | S4 RNA-binding domain-containing protein. | Uncharacterized protein. | 0.961 |
CRG98_009737 | CRG98_015631 | A0A218XIS8 | A0A2I0K5Z2 | S4 RNA-binding domain-containing protein. | G-patch domain-containing protein. | 0.913 |
CRG98_009737 | CRG98_015766 | A0A218XIS8 | A0A2I0K5G3 | S4 RNA-binding domain-containing protein. | Sas10 domain-containing protein. | 0.999 |
CRG98_009737 | CRG98_022243 | A0A218XIS8 | A0A218XLK7 | S4 RNA-binding domain-containing protein. | Uncharacterized protein. | 0.995 |
CRG98_009737 | CRG98_023740 | A0A218XIS8 | A0A2I0JHX4 | S4 RNA-binding domain-containing protein. | RNA helicase. | 0.688 |
CRG98_009737 | CRG98_035120 | A0A218XIS8 | A0A2I0IKF0 | S4 RNA-binding domain-containing protein. | OB_NTP_bind domain-containing protein. | 0.794 |
CRG98_009737 | CRG98_035121 | A0A218XIS8 | A0A2I0IMA3 | S4 RNA-binding domain-containing protein. | Uncharacterized protein. | 0.794 |
CRG98_009737 | CRG98_043055 | A0A218XIS8 | A0A2I0HY54 | S4 RNA-binding domain-containing protein. | G-patch domain-containing protein. | 0.498 |
CRG98_009737 | CRG98_044833 | A0A218XIS8 | A0A2I0HU26 | S4 RNA-binding domain-containing protein. | Uncharacterized protein. | 0.999 |
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