STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_015631G-patch domain-containing protein. (121 aa)    
Predicted Functional Partners:
CRG98_035120
OB_NTP_bind domain-containing protein.
    
 0.940
CRG98_035121
Uncharacterized protein.
    
 0.940
CRG98_043055
G-patch domain-containing protein.
    
 
 0.921
CRG98_022243
Uncharacterized protein.
    
 
 0.918
CRG98_044833
Uncharacterized protein.
    
 
 0.916
CRG98_014271
Uncharacterized protein.
   
   0.915
CRG98_009737
S4 RNA-binding domain-containing protein.
    
   0.913
CRG98_015766
Sas10 domain-containing protein.
    
   0.913
CRG98_004251
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
    
   0.913
CRG98_023740
RNA helicase.
    
 0.909
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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