Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_002183 | CRG98_015382 | A0A2I0L9S3 | A0A2I0K6L3 | DUF4005 domain-containing protein. | Uncharacterized protein. | 0.465 |
CRG98_002183 | CRG98_047017 | A0A2I0L9S3 | A0A218X1W7 | DUF4005 domain-containing protein. | DUF4005 domain-containing protein. | 0.440 |
CRG98_004976 | CRG98_015382 | A0A2I0L1R9 | A0A2I0K6L3 | Homeobox domain-containing protein. | Uncharacterized protein. | 0.488 |
CRG98_004976 | CRG98_018312 | A0A2I0L1R9 | A0A2I0K0P4 | Homeobox domain-containing protein. | Uncharacterized protein. | 0.465 |
CRG98_004976 | CRG98_037232 | A0A2I0L1R9 | A0A2I0IFD0 | Homeobox domain-containing protein. | Uncharacterized protein. | 0.505 |
CRG98_004976 | CRG98_038009 | A0A2I0L1R9 | A0A2I0IC92 | Homeobox domain-containing protein. | C2H2-type domain-containing protein. | 0.430 |
CRG98_004976 | CRG98_044264 | A0A2I0L1R9 | A0A2I0HV04 | Homeobox domain-containing protein. | Mediator of RNA polymerase II transcription subunit 13; Component of the Mediator complex, a coactivator involved in regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.526 |
CRG98_005206 | CRG98_015382 | A0A218W659 | A0A2I0K6L3 | Uncharacterized protein. | Uncharacterized protein. | 0.468 |
CRG98_013048 | CRG98_015382 | A0A2I0KDG6 | A0A2I0K6L3 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.444 |
CRG98_013048 | CRG98_018312 | A0A2I0KDG6 | A0A2I0K0P4 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.404 |
CRG98_013048 | CRG98_037232 | A0A2I0KDG6 | A0A2I0IFD0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.589 |
CRG98_013048 | CRG98_038009 | A0A2I0KDG6 | A0A2I0IC92 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | C2H2-type domain-containing protein. | 0.706 |
CRG98_015382 | CRG98_002183 | A0A2I0K6L3 | A0A2I0L9S3 | Uncharacterized protein. | DUF4005 domain-containing protein. | 0.465 |
CRG98_015382 | CRG98_004976 | A0A2I0K6L3 | A0A2I0L1R9 | Uncharacterized protein. | Homeobox domain-containing protein. | 0.488 |
CRG98_015382 | CRG98_005206 | A0A2I0K6L3 | A0A218W659 | Uncharacterized protein. | Uncharacterized protein. | 0.468 |
CRG98_015382 | CRG98_013048 | A0A2I0K6L3 | A0A2I0KDG6 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.444 |
CRG98_015382 | CRG98_018312 | A0A2I0K6L3 | A0A2I0K0P4 | Uncharacterized protein. | Uncharacterized protein. | 0.417 |
CRG98_015382 | CRG98_037232 | A0A2I0K6L3 | A0A2I0IFD0 | Uncharacterized protein. | Uncharacterized protein. | 0.463 |
CRG98_015382 | CRG98_038009 | A0A2I0K6L3 | A0A2I0IC92 | Uncharacterized protein. | C2H2-type domain-containing protein. | 0.418 |
CRG98_015382 | CRG98_039997 | A0A2I0K6L3 | A0A218WBR2 | Uncharacterized protein. | Rad21_Rec8 domain-containing protein. | 0.423 |
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