STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_015448Uncharacterized protein. (99 aa)    
Predicted Functional Partners:
CRG98_011602
Uncharacterized protein.
    
 0.959
CRG98_038364
WD_REPEATS_REGION domain-containing protein.
    
  0.743
CRG98_038365
LisH domain-containing protein.
    
  0.743
CRG98_015920
Uncharacterized protein.
  
 
  0.694
CRG98_042066
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.623
CRG98_042067
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.623
CRG98_032174
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
   0.623
CRG98_031033
Uncharacterized protein.
    
   0.623
CRG98_013946
Uncharacterized protein; Belongs to the peptidase C19 family.
    
  0.593
CRG98_013947
USP domain-containing protein.
    
  0.593
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.