STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_014687Uncharacterized protein. (280 aa)    
Predicted Functional Partners:
CRG98_023808
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.587
CRG98_003019
Small nuclear ribonucleoprotein-associated protein.
    
 0.574
CRG98_028930
Sm domain-containing protein.
    
  0.571
CRG98_026663
LRRNT_2 domain-containing protein.
  
 
  0.570
CRG98_047569
Small nuclear ribonucleoprotein Sm D2.
    
 0.566
CRG98_017763
Small nuclear ribonucleoprotein Sm D2.
    
 0.566
CRG98_009381
Uncharacterized protein.
  
 
   0.564
CRG98_029375
EF-1-gamma C-terminal domain-containing protein.
    
  0.563
CRG98_029374
Uncharacterized protein; Belongs to the GST superfamily.
    
  0.563
CRG98_020381
Uncharacterized protein.
    
 0.563
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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