Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_002862 | CRG98_003028 | A0A2I0ILP6 | A0A2I0L782 | Ubiquitin-like domain-containing protein. | Phytocyanin domain-containing protein. | 0.967 |
CRG98_002862 | CRG98_004333 | A0A2I0ILP6 | A0A218XH86 | Ubiquitin-like domain-containing protein. | RPOLD domain-containing protein. | 0.967 |
CRG98_002862 | CRG98_013327 | A0A2I0ILP6 | A0A2I0KEL7 | Ubiquitin-like domain-containing protein. | DUF630 domain-containing protein. | 0.961 |
CRG98_002862 | CRG98_015440 | A0A2I0ILP6 | A0A2I0K6I5 | Ubiquitin-like domain-containing protein. | Helicase ATP-binding domain-containing protein. | 0.811 |
CRG98_002862 | CRG98_015441 | A0A2I0ILP6 | A0A2I0K8X1 | Ubiquitin-like domain-containing protein. | Uncharacterized protein. | 0.811 |
CRG98_002862 | CRG98_015442 | A0A2I0ILP6 | A0A2I0K6K2 | Ubiquitin-like domain-containing protein. | SnAC domain-containing protein. | 0.811 |
CRG98_002862 | CRG98_021884 | A0A2I0ILP6 | A0A2I0JNF0 | Ubiquitin-like domain-containing protein. | Plus3 domain-containing protein. | 0.690 |
CRG98_002862 | CRG98_029206 | A0A2I0ILP6 | A0A2I0J2A9 | Ubiquitin-like domain-containing protein. | QLQ domain-containing protein. | 0.811 |
CRG98_002862 | CRG98_037104 | A0A2I0ILP6 | A0A2I0IES9 | Ubiquitin-like domain-containing protein. | Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. | 0.938 |
CRG98_003028 | CRG98_002862 | A0A2I0L782 | A0A2I0ILP6 | Phytocyanin domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.967 |
CRG98_003028 | CRG98_004333 | A0A2I0L782 | A0A218XH86 | Phytocyanin domain-containing protein. | RPOLD domain-containing protein. | 0.595 |
CRG98_003028 | CRG98_013327 | A0A2I0L782 | A0A2I0KEL7 | Phytocyanin domain-containing protein. | DUF630 domain-containing protein. | 0.967 |
CRG98_003028 | CRG98_015440 | A0A2I0L782 | A0A2I0K6I5 | Phytocyanin domain-containing protein. | Helicase ATP-binding domain-containing protein. | 0.460 |
CRG98_003028 | CRG98_015441 | A0A2I0L782 | A0A2I0K8X1 | Phytocyanin domain-containing protein. | Uncharacterized protein. | 0.460 |
CRG98_003028 | CRG98_015442 | A0A2I0L782 | A0A2I0K6K2 | Phytocyanin domain-containing protein. | SnAC domain-containing protein. | 0.460 |
CRG98_003028 | CRG98_021884 | A0A2I0L782 | A0A2I0JNF0 | Phytocyanin domain-containing protein. | Plus3 domain-containing protein. | 0.941 |
CRG98_003028 | CRG98_029206 | A0A2I0L782 | A0A2I0J2A9 | Phytocyanin domain-containing protein. | QLQ domain-containing protein. | 0.460 |
CRG98_004333 | CRG98_002862 | A0A218XH86 | A0A2I0ILP6 | RPOLD domain-containing protein. | Ubiquitin-like domain-containing protein. | 0.967 |
CRG98_004333 | CRG98_003028 | A0A218XH86 | A0A2I0L782 | RPOLD domain-containing protein. | Phytocyanin domain-containing protein. | 0.595 |
CRG98_004333 | CRG98_013327 | A0A218XH86 | A0A2I0KEL7 | RPOLD domain-containing protein. | DUF630 domain-containing protein. | 0.962 |
page 1 of 5