STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_011845Uncharacterized protein; Belongs to the terpene synthase family. (356 aa)    
Predicted Functional Partners:
CRG98_013529
Uncharacterized protein.
   
 
 0.727
CRG98_002165
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 
 0.672
CRG98_048344
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
   
 
 0.670
CRG98_023783
Terpene_synth domain-containing protein.
  
 
  0.619
CRG98_031314
Terpene_synth domain-containing protein.
  
 
  0.613
CRG98_019014
Uncharacterized protein.
  
 
 0.557
CRG98_049832
Terpene_synth_C domain-containing protein.
  
 
  0.537
CRG98_048941
Terpene_synth domain-containing protein.
  
  
 0.520
CRG98_016777
Uncharacterized protein; Belongs to the terpene synthase family.
  
  
 
0.515
CRG98_028318
Uncharacterized protein.
  
     0.499
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.