STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_011054PK_C domain-containing protein. (137 aa)    
Predicted Functional Partners:
CRG98_035748
Uncharacterized protein.
  
 0.927
CRG98_035416
Uncharacterized protein.
  
 0.922
CRG98_035418
NBD_C domain-containing protein.
  
 0.922
CRG98_035419
Uncharacterized protein.
  
 0.922
CRG98_035417
Uncharacterized protein.
  
 0.922
CRG98_039868
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.877
CRG98_038087
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.877
CRG98_034468
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.877
CRG98_034467
Uncharacterized protein.
  
 
 0.877
CRG98_020612
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.876
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.