STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_009560KH type-2 domain-containing protein. (157 aa)    
Predicted Functional Partners:
CRG98_029375
EF-1-gamma C-terminal domain-containing protein.
   
 
 0.999
CRG98_029374
Uncharacterized protein; Belongs to the GST superfamily.
   
 
 0.999
CRG98_031665
Ribos_L4_asso_C domain-containing protein.
  
 0.997
CRG98_002862
Ubiquitin-like domain-containing protein.
   
 0.997
CRG98_005963
Uncharacterized protein.
   
 
 0.995
CRG98_000050
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.995
CRG98_015381
S1-like domain-containing protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
  
 0.994
CRG98_032948
Eukaryotic translation initiation factor 3 subunit G; RNA-binding component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. This subunit can bind 18S rRNA.
   
 0.994
CRG98_031618
Uncharacterized protein.
  
 
 0.994
CRG98_030525
Uncharacterized protein.
   
 
 0.994
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.