STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_008415Uncharacterized protein. (190 aa)    
Predicted Functional Partners:
CRG98_009796
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
 0.997
CRG98_007719
Glutamine amidotransferase type-1 domain-containing protein.
  
 
 0.996
CRG98_025974
Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
 0.994
CRG98_005979
Uncharacterized protein.
  
 0.994
CRG98_025973
Glutamine amidotransferase type-2 domain-containing protein.
  
 0.991
CRG98_050446
ATP-grasp domain-containing protein.
 
 0.989
CRG98_043165
Formyl_trans_N domain-containing protein.
 
 0.989
CRG98_029028
Uncharacterized protein.
 
 0.989
CRG98_005940
Uncharacterized protein.
 
 0.989
CRG98_043164
Formyl_trans_N domain-containing protein.
  
 0.982
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
Server load: low (28%) [HD]