STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_007932Xyloglucan endotransglucosylase/hydrolase; Catalyzes xyloglucan endohydrolysis (XEH) and/or endotransglycosylation (XET). Cleaves and religates xyloglucan polymers, an essential constituent of the primary cell wall, and thereby participates in cell wall construction of growing tissues. Belongs to the glycosyl hydrolase 16 family. (281 aa)    
Predicted Functional Partners:
CRG98_005773
Uncharacterized protein.
   
 0.836
CRG98_038497
Uncharacterized protein.
    
 0.822
CRG98_016350
Non-specific serine/threonine protein kinase.
    
 0.822
CRG98_011327
Uncharacterized protein.
    
  0.817
CRG98_011328
Uncharacterized protein.
    
  0.817
CRG98_044072
Uncharacterized protein.
    
 0.806
CRG98_010972
Uncharacterized protein.
    
 0.806
CRG98_040010
BHLH domain-containing protein.
    
 0.783
CRG98_050216
Uncharacterized protein.
    
 0.783
CRG98_048471
BHLH domain-containing protein.
    
 0.783
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.