Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CRG98_000996 | CRG98_004751 | A0A2I0LD61 | A0A2I0L2P0 | Uncharacterized protein. | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | 0.908 |
CRG98_000996 | CRG98_006143 | A0A2I0LD61 | A0A2I0KYN1 | Uncharacterized protein. | Uncharacterized protein. | 0.790 |
CRG98_000996 | CRG98_015730 | A0A2I0LD61 | A0A2I0K5M4 | Uncharacterized protein. | Uncharacterized protein. | 0.993 |
CRG98_000996 | CRG98_027622 | A0A2I0LD61 | A0A2I0J7V6 | Uncharacterized protein. | Uncharacterized protein. | 0.993 |
CRG98_000996 | CRG98_040814 | A0A2I0LD61 | A0A2I0I4M3 | Uncharacterized protein. | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | 0.908 |
CRG98_004751 | CRG98_000996 | A0A2I0L2P0 | A0A2I0LD61 | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.908 |
CRG98_004751 | CRG98_006143 | A0A2I0L2P0 | A0A2I0KYN1 | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.817 |
CRG98_004751 | CRG98_012289 | A0A2I0L2P0 | A0A218W2H3 | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | 0.805 |
CRG98_004751 | CRG98_015730 | A0A2I0L2P0 | A0A2I0K5M4 | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.826 |
CRG98_004751 | CRG98_027622 | A0A2I0L2P0 | A0A2I0J7V6 | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | Uncharacterized protein. | 0.826 |
CRG98_004751 | CRG98_033192 | A0A2I0L2P0 | A0A2I0ISJ9 | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.901 |
CRG98_006143 | CRG98_000996 | A0A2I0KYN1 | A0A2I0LD61 | Uncharacterized protein. | Uncharacterized protein. | 0.790 |
CRG98_006143 | CRG98_004751 | A0A2I0KYN1 | A0A2I0L2P0 | Uncharacterized protein. | Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family. | 0.817 |
CRG98_006143 | CRG98_012289 | A0A2I0KYN1 | A0A218W2H3 | Uncharacterized protein. | Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family. | 0.771 |
CRG98_006143 | CRG98_015730 | A0A2I0KYN1 | A0A2I0K5M4 | Uncharacterized protein. | Uncharacterized protein. | 0.715 |
CRG98_006143 | CRG98_022087 | A0A2I0KYN1 | A0A2I0JPL7 | Uncharacterized protein. | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | 0.677 |
CRG98_006143 | CRG98_022088 | A0A2I0KYN1 | A0A2I0JMD4 | Uncharacterized protein. | Exocyst complex component SEC5; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane. Belongs to the SEC5 family. | 0.677 |
CRG98_006143 | CRG98_027622 | A0A2I0KYN1 | A0A2I0J7V6 | Uncharacterized protein. | Uncharacterized protein. | 0.715 |
CRG98_006143 | CRG98_030462 | A0A2I0KYN1 | A0A2I0J0A1 | Uncharacterized protein. | Uncharacterized protein. | 0.683 |
CRG98_006143 | CRG98_033192 | A0A2I0KYN1 | A0A2I0ISJ9 | Uncharacterized protein. | Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX. | 0.723 |
page 1 of 3