STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CRG98_003833Uncharacterized protein. (246 aa)    
Predicted Functional Partners:
CRG98_024595
Uncharacterized protein.
 
 0.997
CRG98_006237
Homoserine dehydrogenase.
 
 0.997
CRG98_027056
AA_kinase domain-containing protein.
  
 0.976
CRG98_027057
Aspartokinase; Belongs to the aspartokinase family.
  
 0.976
CRG98_021985
Threonine dehydratase.
  
 
 0.951
CRG98_001557
Uncharacterized protein.
   
 0.939
CRG98_034099
PALP domain-containing protein.
  
 
 0.928
CRG98_003336
Uncharacterized protein.
  
 
 0.928
CRG98_019121
Hcy-binding domain-containing protein.
    
 0.920
CRG98_047473
Beta_elim_lyase domain-containing protein.
    
 0.919
Your Current Organism:
Punica granatum
NCBI taxonomy Id: 22663
Other names: P. granatum, Punica granatum L., granado, grenadier, pomegranate, shi liu, zakuro
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.