STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_0268Zinc metalloprotease; Belongs to the SprT family. (152 aa)    
Predicted Functional Partners:
BC_0864
Protein ecsB.
  
     0.638
BC_1051
Protein ecsB.
  
     0.638
BC_0039
Hypothetical protein; Involved in initiation control of chromosome replication. Belongs to the YabA family.
  
     0.585
BC_0267
Transcription accessory protein (S1 RNA binding domain).
  
  
 0.582
BC_3926
ATP-dependent protease La.
 
     0.566
BC_0265
Hypothetical Cytosolic Protein.
 
     0.560
BC_1561
Hypothetical Cytosolic Protein; Belongs to the UPF0398 family.
  
    0.549
BC_2932
Phosphoglycerol transferase; Belongs to the LTA synthase family.
  
    0.542
mreD
Rod shape-determining protein mreD.
  
     0.508
BC_1519
TPR-repeat-containing protein.
 
     0.507
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.