Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_1472 | BC_1474 | BC_1472 | BC_1474 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | ResB protein. | 0.407 |
BC_1472 | BC_1475 | BC_1472 | BC_1475 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | ResB protein. | 0.407 |
BC_1472 | BC_1476 | BC_1472 | BC_1476 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | Protein resC. | 0.437 |
BC_1472 | resA | BC_1472 | BC_1473 | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | ResA protein; Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalently attached. | 0.635 |
BC_1474 | BC_1472 | BC_1474 | BC_1472 | ResB protein. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.407 |
BC_1474 | BC_1475 | BC_1474 | BC_1475 | ResB protein. | ResB protein. | 0.994 |
BC_1474 | BC_1476 | BC_1474 | BC_1476 | ResB protein. | Protein resC. | 0.982 |
BC_1474 | BC_1721 | BC_1474 | BC_1721 | ResB protein. | Cytochrome c-type biogenesis protein ccdA. | 0.538 |
BC_1474 | BC_3662 | BC_1474 | BC_3662 | ResB protein. | Cytochrome c-type biogenesis protein ccdA. | 0.565 |
BC_1474 | bdbC | BC_1474 | BC_0779 | ResB protein. | Thiol-disulfide oxdoreductase BdbC; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily. | 0.427 |
BC_1474 | resA | BC_1474 | BC_1473 | ResB protein. | ResA protein; Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalently attached. | 0.913 |
BC_1474 | ribD | BC_1474 | BC_3387 | ResB protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.611 |
BC_1474 | ribD-2 | BC_1474 | BC_4109 | ResB protein. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.611 |
BC_1475 | BC_1472 | BC_1475 | BC_1472 | ResB protein. | Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family. | 0.407 |
BC_1475 | BC_1474 | BC_1475 | BC_1474 | ResB protein. | ResB protein. | 0.994 |
BC_1475 | BC_1476 | BC_1475 | BC_1476 | ResB protein. | Protein resC. | 0.981 |
BC_1475 | BC_1721 | BC_1475 | BC_1721 | ResB protein. | Cytochrome c-type biogenesis protein ccdA. | 0.510 |
BC_1475 | BC_3662 | BC_1475 | BC_3662 | ResB protein. | Cytochrome c-type biogenesis protein ccdA. | 0.545 |
BC_1475 | bdbC | BC_1475 | BC_0779 | ResB protein. | Thiol-disulfide oxdoreductase BdbC; Required for disulfide bond formation in some proteins. Belongs to the DsbB family. BdbC subfamily. | 0.537 |
BC_1475 | resA | BC_1475 | BC_1473 | ResB protein. | ResA protein; Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalently attached. | 0.829 |
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