Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_0595 | BC_1844 | BC_0595 | BC_1844 | Cadmium efflux system accessory protein. | Nitroreductase family protein. | 0.611 |
BC_0595 | BC_3025 | BC_0595 | BC_3025 | Cadmium efflux system accessory protein. | Transcriptional regulator, MarR family. | 0.598 |
BC_0595 | BC_3731 | BC_0595 | BC_3731 | Cadmium efflux system accessory protein. | COP associated protein. | 0.656 |
BC_0595 | BC_4474 | BC_0595 | BC_4474 | Cadmium efflux system accessory protein. | Transcriptional regulator, MarR family. | 0.602 |
BC_0595 | azoR1 | BC_0595 | BC_1835 | Cadmium efflux system accessory protein. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.524 |
BC_0595 | azoR2 | BC_0595 | BC_2194 | Cadmium efflux system accessory protein. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.436 |
BC_0595 | spxA2 | BC_0595 | BC_3402 | Cadmium efflux system accessory protein. | Arsenate reductase family protein; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily. | 0.478 |
BC_1787 | BC_5037 | BC_1787 | BC_5037 | Hypothetical protein. | Pirin; Belongs to the pirin family. | 0.694 |
BC_1787 | azoR1 | BC_1787 | BC_1835 | Hypothetical protein. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.555 |
BC_1787 | azoR2 | BC_1787 | BC_2194 | Hypothetical protein. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.458 |
BC_1842 | BC_1844 | BC_1842 | BC_1844 | RRF2 family protein. | Nitroreductase family protein. | 0.643 |
BC_1842 | BC_5037 | BC_1842 | BC_5037 | RRF2 family protein. | Pirin; Belongs to the pirin family. | 0.430 |
BC_1842 | azoR1 | BC_1842 | BC_1835 | RRF2 family protein. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.567 |
BC_1844 | BC_0595 | BC_1844 | BC_0595 | Nitroreductase family protein. | Cadmium efflux system accessory protein. | 0.611 |
BC_1844 | BC_1842 | BC_1844 | BC_1842 | Nitroreductase family protein. | RRF2 family protein. | 0.643 |
BC_1844 | BC_3025 | BC_1844 | BC_3025 | Nitroreductase family protein. | Transcriptional regulator, MarR family. | 0.596 |
BC_1844 | BC_3731 | BC_1844 | BC_3731 | Nitroreductase family protein. | COP associated protein. | 0.639 |
BC_1844 | BC_4474 | BC_1844 | BC_4474 | Nitroreductase family protein. | Transcriptional regulator, MarR family. | 0.618 |
BC_1844 | BC_5037 | BC_1844 | BC_5037 | Nitroreductase family protein. | Pirin; Belongs to the pirin family. | 0.418 |
BC_1844 | azoR1 | BC_1844 | BC_1835 | Nitroreductase family protein. | FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family. | 0.649 |
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