Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| rho | spoIISB | BC_5332 | BC_2437 | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Antitoxin that binds toxin SpoIISA and neutralizes its toxic activity. Upon coexpression with SpoIISA in E.coli normal growth is restored. Belongs to the SpoIISB antitoxin family. | 0.592 |
| spo0A | spoIISB | BC_4170 | BC_2437 | Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with Spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. Repressor of abrB, activator of the spoIIa operon. Binds the DNA sequence 5'-TGNCGAA-3' (0A box) (By similarity). | Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Antitoxin that binds toxin SpoIISA and neutralizes its toxic activity. Upon coexpression with SpoIISA in E.coli normal growth is restored. Belongs to the SpoIISB antitoxin family. | 0.424 |
| spoIISA | spoIISB | BC_2436 | BC_2437 | SpoIISA like protein; Toxic component of a type II toxin-antitoxin (TA) system. Upon expression in E.coli growth ceases. Upon coexpression with SpoIISB in E.coli normal growth is restored. | Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Antitoxin that binds toxin SpoIISA and neutralizes its toxic activity. Upon coexpression with SpoIISA in E.coli normal growth is restored. Belongs to the SpoIISB antitoxin family. | 0.863 |
| spoIISB | rho | BC_2437 | BC_5332 | Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Antitoxin that binds toxin SpoIISA and neutralizes its toxic activity. Upon coexpression with SpoIISA in E.coli normal growth is restored. Belongs to the SpoIISB antitoxin family. | Transcription termination factor rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template. | 0.592 |
| spoIISB | spo0A | BC_2437 | BC_4170 | Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Antitoxin that binds toxin SpoIISA and neutralizes its toxic activity. Upon coexpression with SpoIISA in E.coli normal growth is restored. Belongs to the SpoIISB antitoxin family. | Stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with Spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process. Repressor of abrB, activator of the spoIIa operon. Binds the DNA sequence 5'-TGNCGAA-3' (0A box) (By similarity). | 0.424 |
| spoIISB | spoIISA | BC_2437 | BC_2436 | Hypothetical protein; Antitoxin component of a type II toxin-antitoxin (TA) system. Antitoxin that binds toxin SpoIISA and neutralizes its toxic activity. Upon coexpression with SpoIISA in E.coli normal growth is restored. Belongs to the SpoIISB antitoxin family. | SpoIISA like protein; Toxic component of a type II toxin-antitoxin (TA) system. Upon expression in E.coli growth ceases. Upon coexpression with SpoIISB in E.coli normal growth is restored. | 0.863 |