STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_3932Hypothetical Cytosolic Protein. (88 aa)    
Predicted Functional Partners:
BC_3933
Hypothetical protein; Belongs to the UPF0342 family.
 
    0.787
BC_5183
Hypothetical Membrane Spanning Protein.
  
    0.713
BC_5460
Hypothetical protein.
  
     0.672
BC_4966
Hypothetical Cytosolic Protein.
  
  
 0.658
BC_1226
Acetyl esterase.
   
    0.647
BC_5290
Hypothetical protein.
  
    0.633
rsmD
Methyltransferase.
  
  
 0.583
glnR
Transcriptional regulator, MerR family; Transcription repressor during nitrogen excess. On the contrary of the MerR members, which require longer DNA sites for high- affinity binding, GlnR requires a DNA sequence of 17 nucleotides as minimal binding site.
  
    0.561
BC_1051
Protein ecsB.
  
    0.556
BC_1545
Hypothetical protein.
  
    0.543
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.