Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_4424 | BC_4425 | BC_4424 | BC_4425 | Cysteine desulfhydrase. | Hypothetical transcriptional regulator. | 0.872 |
BC_4424 | nadA | BC_4424 | BC_4421 | Cysteine desulfhydrase. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.816 |
BC_4424 | nadB | BC_4424 | BC_4423 | Cysteine desulfhydrase. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.817 |
BC_4424 | nadC | BC_4424 | BC_4422 | Cysteine desulfhydrase. | Nicotinate-nucleotide pyrophosphorylase, carboxylating; Belongs to the NadC/ModD family. | 0.761 |
BC_4425 | BC_4424 | BC_4425 | BC_4424 | Hypothetical transcriptional regulator. | Cysteine desulfhydrase. | 0.872 |
BC_4425 | nadA | BC_4425 | BC_4421 | Hypothetical transcriptional regulator. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.669 |
BC_4425 | nadB | BC_4425 | BC_4423 | Hypothetical transcriptional regulator. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.690 |
BC_4425 | nadC | BC_4425 | BC_4422 | Hypothetical transcriptional regulator. | Nicotinate-nucleotide pyrophosphorylase, carboxylating; Belongs to the NadC/ModD family. | 0.662 |
BC_5192 | nadA | BC_5192 | BC_4421 | Competence protein F. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.596 |
BC_5192 | nadB | BC_5192 | BC_4423 | Competence protein F. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.592 |
bioA | nadA | BC_4119 | BC_4421 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.651 |
cysE | nadA | BC_0109 | BC_4421 | Serine acetyltransferase. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.783 |
gmk | nadA | BC_3869 | BC_4421 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | 0.718 |
nadA | BC_4424 | BC_4421 | BC_4424 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Cysteine desulfhydrase. | 0.816 |
nadA | BC_4425 | BC_4421 | BC_4425 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Hypothetical transcriptional regulator. | 0.669 |
nadA | BC_5192 | BC_4421 | BC_5192 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Competence protein F. | 0.596 |
nadA | bioA | BC_4421 | BC_4119 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.651 |
nadA | cysE | BC_4421 | BC_0109 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Serine acetyltransferase. | 0.783 |
nadA | gmk | BC_4421 | BC_3869 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.718 |
nadA | nadB | BC_4421 | BC_4423 | Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate. | L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate. | 0.999 |
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