Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_2917 | BC_4547 | BC_2917 | BC_4547 | TPR-repeat-containing protein. | Cell surface protein. | 0.435 |
BC_2917 | BC_4548 | BC_2917 | BC_4548 | TPR-repeat-containing protein. | Cell surface protein. | 0.581 |
BC_2917 | isdC | BC_2917 | BC_4549 | TPR-repeat-containing protein. | Cell surface protein. | 0.532 |
BC_4363 | BC_4544 | BC_4363 | BC_4544 | Ferrichrome-binding protein. | Ferrichrome transport ATP-binding protein fhuC. | 0.938 |
BC_4363 | BC_4545 | BC_4363 | BC_4545 | Ferrichrome-binding protein. | Ferrichrome transport system permease protein fhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.921 |
BC_4363 | BC_4547 | BC_4363 | BC_4547 | Ferrichrome-binding protein. | Cell surface protein. | 0.774 |
BC_4363 | BC_4548 | BC_4363 | BC_4548 | Ferrichrome-binding protein. | Cell surface protein. | 0.834 |
BC_4363 | isdC | BC_4363 | BC_4549 | Ferrichrome-binding protein. | Cell surface protein. | 0.775 |
BC_4363 | isdE | BC_4363 | BC_4546 | Ferrichrome-binding protein. | Ferrichrome-binding protein. | 0.570 |
BC_4363 | isdG | BC_4363 | BC_4542 | Ferrichrome-binding protein. | Hypothetical Cytosolic Protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron; Belongs to the antibiotic biosynthesis monooxygenase family. Heme-degrading monooxygenase IsdG subfamily. | 0.726 |
BC_4363 | srtB | BC_4363 | BC_4543 | Ferrichrome-binding protein. | Hypothetical Exported Protein. | 0.692 |
BC_4544 | BC_4363 | BC_4544 | BC_4363 | Ferrichrome transport ATP-binding protein fhuC. | Ferrichrome-binding protein. | 0.938 |
BC_4544 | BC_4545 | BC_4544 | BC_4545 | Ferrichrome transport ATP-binding protein fhuC. | Ferrichrome transport system permease protein fhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.999 |
BC_4544 | BC_4547 | BC_4544 | BC_4547 | Ferrichrome transport ATP-binding protein fhuC. | Cell surface protein. | 0.949 |
BC_4544 | BC_4548 | BC_4544 | BC_4548 | Ferrichrome transport ATP-binding protein fhuC. | Cell surface protein. | 0.921 |
BC_4544 | isdC | BC_4544 | BC_4549 | Ferrichrome transport ATP-binding protein fhuC. | Cell surface protein. | 0.884 |
BC_4544 | isdE | BC_4544 | BC_4546 | Ferrichrome transport ATP-binding protein fhuC. | Ferrichrome-binding protein. | 0.996 |
BC_4544 | isdG | BC_4544 | BC_4542 | Ferrichrome transport ATP-binding protein fhuC. | Hypothetical Cytosolic Protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron; Belongs to the antibiotic biosynthesis monooxygenase family. Heme-degrading monooxygenase IsdG subfamily. | 0.742 |
BC_4544 | srtB | BC_4544 | BC_4543 | Ferrichrome transport ATP-binding protein fhuC. | Hypothetical Exported Protein. | 0.985 |
BC_4545 | BC_4363 | BC_4545 | BC_4363 | Ferrichrome transport system permease protein fhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | Ferrichrome-binding protein. | 0.921 |
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