STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_4548Cell surface protein. (158 aa)    
Predicted Functional Partners:
srtB
Hypothetical Exported Protein.
 
  
 0.978
isdC
Cell surface protein.
 
  
0.974
isdE
Ferrichrome-binding protein.
 
  
 0.961
BC_4547
Cell surface protein.
 
  
0.957
isdG
Hypothetical Cytosolic Protein; Allows bacterial pathogens to use the host heme as an iron source. Catalyzes the oxidative degradation of the heme macrocyclic porphyrin ring to the biliverdin in the presence of a suitable electron donor such as ascorbate or NADPH--cytochrome P450 reductase, with subsequent release of free iron; Belongs to the antibiotic biosynthesis monooxygenase family. Heme-degrading monooxygenase IsdG subfamily.
 
  
 0.935
BC_4544
Ferrichrome transport ATP-binding protein fhuC.
 
  
 0.921
BC_4545
Ferrichrome transport system permease protein fhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.919
BC_4363
Ferrichrome-binding protein.
 
  
 0.834
esaA
Hypothetical Membrane Spanning Protein.
  
     0.598
BC_2917
TPR-repeat-containing protein.
  
     0.581
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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