Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_0169 | BC_0782 | BC_0169 | BC_0782 | Spore germination protein GerD. | Spore germination protein, gerB family. | 0.777 |
BC_0169 | BC_0783 | BC_0169 | BC_0783 | Spore germination protein GerD. | Spore germination protein, gerC family. | 0.777 |
BC_0169 | BC_0784 | BC_0169 | BC_0784 | Spore germination protein GerD. | Spore germination protein, gerA family. | 0.777 |
BC_0169 | BC_4974 | BC_0169 | BC_4974 | Spore germination protein GerD. | Cell wall endopeptidase, family M23/M37. | 0.765 |
BC_0169 | BC_5390 | BC_0169 | BC_5390 | Spore germination protein GerD. | Cell wall hydrolase cwlJ. | 0.723 |
BC_0169 | cotE | BC_0169 | BC_3770 | Spore germination protein GerD. | Spore coat protein E. | 0.775 |
BC_0169 | gerQ | BC_0169 | BC_5391 | Spore germination protein GerD. | Hypothetical protein. | 0.860 |
BC_0169 | sasP-2 | BC_0169 | BC_4646 | Spore germination protein GerD. | Small acid-soluble spore protein; SASP are bound to spore DNA. They are double-stranded DNA- binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to UV light (By similarity). | 0.886 |
BC_0169 | yabP | BC_0169 | BC_0063 | Spore germination protein GerD. | Hypothetical protein. | 0.466 |
BC_0782 | BC_0169 | BC_0782 | BC_0169 | Spore germination protein, gerB family. | Spore germination protein GerD. | 0.777 |
BC_0782 | BC_0783 | BC_0782 | BC_0783 | Spore germination protein, gerB family. | Spore germination protein, gerC family. | 0.988 |
BC_0782 | BC_0784 | BC_0782 | BC_0784 | Spore germination protein, gerB family. | Spore germination protein, gerA family. | 0.983 |
BC_0782 | gerQ | BC_0782 | BC_5391 | Spore germination protein, gerB family. | Hypothetical protein. | 0.502 |
BC_0782 | sasP-2 | BC_0782 | BC_4646 | Spore germination protein, gerB family. | Small acid-soluble spore protein; SASP are bound to spore DNA. They are double-stranded DNA- binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to UV light (By similarity). | 0.777 |
BC_0783 | BC_0169 | BC_0783 | BC_0169 | Spore germination protein, gerC family. | Spore germination protein GerD. | 0.777 |
BC_0783 | BC_0782 | BC_0783 | BC_0782 | Spore germination protein, gerC family. | Spore germination protein, gerB family. | 0.988 |
BC_0783 | BC_0784 | BC_0783 | BC_0784 | Spore germination protein, gerC family. | Spore germination protein, gerA family. | 0.987 |
BC_0783 | gerQ | BC_0783 | BC_5391 | Spore germination protein, gerC family. | Hypothetical protein. | 0.515 |
BC_0783 | sasP-2 | BC_0783 | BC_4646 | Spore germination protein, gerC family. | Small acid-soluble spore protein; SASP are bound to spore DNA. They are double-stranded DNA- binding proteins that cause DNA to change to an a-like conformation. They protect the DNA backbone from chemical and enzymatic cleavage and are thus involved in dormant spore's high resistance to UV light (By similarity). | 0.777 |
BC_0784 | BC_0169 | BC_0784 | BC_0169 | Spore germination protein, gerA family. | Spore germination protein GerD. | 0.777 |
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