STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_0211Oligopeptide-binding protein oppA. (527 aa)    
Predicted Functional Partners:
BC_0209
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
 
  
 0.981
BC_0207
Oligopeptide transport system permease protein oppB.
  
 0.980
BC_0210
Oligopeptide transport ATP-binding protein oppF.
 
  
 0.974
BC_0208
Oligopeptide transport system permease protein oppC.
  
 0.971
BC_0216
Oligopeptide-binding protein oppA.
  
 
 
0.968
BC_1180
Oligopeptide transport system permease protein oppB.
 
 0.966
BC_1181
Oligopeptide transport system permease protein oppC.
 
 0.960
BC_1182
Oligopeptide transport ATP-binding protein oppD; Belongs to the ABC transporter superfamily.
 
 
 0.955
BC_1183
Oligopeptide transport ATP-binding protein oppF; Belongs to the ABC transporter superfamily.
 
 
 0.952
BC_0215
Oligopeptide-binding protein oppA.
  
 
 
0.924
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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