Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_0337 | BC_0338 | BC_0337 | BC_0338 | Hypothetical Membrane Spanning Protein. | Hypothetical protein. | 0.538 |
BC_0337 | BC_0342 | BC_0337 | BC_0342 | Hypothetical Membrane Spanning Protein. | Sex pheromone staph-cAM373 precursor. | 0.428 |
BC_0337 | ligA | BC_0337 | BC_0341 | Hypothetical Membrane Spanning Protein. | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.484 |
BC_0337 | pcrA | BC_0337 | BC_0340 | Hypothetical Membrane Spanning Protein. | DNA helicase II. | 0.498 |
BC_0337 | pcrB | BC_0337 | BC_0339 | Hypothetical Membrane Spanning Protein. | Geranylgeranylglyceryl diphosphate synthase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.499 |
BC_0338 | BC_0337 | BC_0338 | BC_0337 | Hypothetical protein. | Hypothetical Membrane Spanning Protein. | 0.538 |
BC_0338 | BC_0342 | BC_0338 | BC_0342 | Hypothetical protein. | Sex pheromone staph-cAM373 precursor. | 0.524 |
BC_0338 | ligA | BC_0338 | BC_0341 | Hypothetical protein. | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.554 |
BC_0338 | pcrA | BC_0338 | BC_0340 | Hypothetical protein. | DNA helicase II. | 0.580 |
BC_0338 | pcrB | BC_0338 | BC_0339 | Hypothetical protein. | Geranylgeranylglyceryl diphosphate synthase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.580 |
BC_0342 | BC_0337 | BC_0342 | BC_0337 | Sex pheromone staph-cAM373 precursor. | Hypothetical Membrane Spanning Protein. | 0.428 |
BC_0342 | BC_0338 | BC_0342 | BC_0338 | Sex pheromone staph-cAM373 precursor. | Hypothetical protein. | 0.524 |
BC_0342 | ligA | BC_0342 | BC_0341 | Sex pheromone staph-cAM373 precursor. | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | 0.922 |
BC_0342 | pcrA | BC_0342 | BC_0340 | Sex pheromone staph-cAM373 precursor. | DNA helicase II. | 0.917 |
BC_0342 | pcrB | BC_0342 | BC_0339 | Sex pheromone staph-cAM373 precursor. | Geranylgeranylglyceryl diphosphate synthase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.791 |
ligA | BC_0337 | BC_0341 | BC_0337 | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | Hypothetical Membrane Spanning Protein. | 0.484 |
ligA | BC_0338 | BC_0341 | BC_0338 | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | Hypothetical protein. | 0.554 |
ligA | BC_0342 | BC_0341 | BC_0342 | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | Sex pheromone staph-cAM373 precursor. | 0.922 |
ligA | pcrA | BC_0341 | BC_0340 | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | DNA helicase II. | 0.962 |
ligA | pcrB | BC_0341 | BC_0339 | NAD-dependent DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA. | Geranylgeranylglyceryl diphosphate synthase; Prenyltransferase that catalyzes in vivo the transfer of the heptaprenyl moiety of heptaprenyl pyrophosphate (HepPP; 35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond- formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales. | 0.783 |
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