Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_0027 | BC_0510 | BC_0027 | BC_0510 | Hypothetical Cytosolic Protein. | Integral membrane protein. | 0.546 |
BC_0027 | BC_3186 | BC_0027 | BC_3186 | Hypothetical Cytosolic Protein. | Hypothetical protein. | 0.691 |
BC_0027 | BC_4580 | BC_0027 | BC_4580 | Hypothetical Cytosolic Protein. | Replication initiation and membrane attachment protein. | 0.580 |
BC_0027 | BC_5461 | BC_0027 | BC_5461 | Hypothetical Cytosolic Protein. | Hypothetical membrane protein yycH. | 0.404 |
BC_0027 | mreD | BC_0027 | BC_4444 | Hypothetical Cytosolic Protein. | Rod shape-determining protein mreD. | 0.566 |
BC_0510 | BC_0027 | BC_0510 | BC_0027 | Integral membrane protein. | Hypothetical Cytosolic Protein. | 0.546 |
BC_0510 | BC_0511 | BC_0510 | BC_0511 | Integral membrane protein. | Glutamate synthase [NADPH] large chain. | 0.524 |
BC_0510 | BC_1197 | BC_0510 | BC_1197 | Integral membrane protein. | IG hypothetical 17542; Belongs to the UPF0738 family. | 0.537 |
BC_0510 | BC_3186 | BC_0510 | BC_3186 | Integral membrane protein. | Hypothetical protein. | 0.513 |
BC_0510 | BC_4580 | BC_0510 | BC_4580 | Integral membrane protein. | Replication initiation and membrane attachment protein. | 0.543 |
BC_0510 | BC_4677 | BC_0510 | BC_4677 | Integral membrane protein. | General stress protein. | 0.534 |
BC_0510 | BC_4690 | BC_0510 | BC_4690 | Integral membrane protein. | Hypothetical Cytosolic Protein; Belongs to the UPF0354 family. | 0.567 |
BC_0510 | BC_4937 | BC_0510 | BC_4937 | Integral membrane protein. | Hypothetical protein; Belongs to the UPF0349 family. | 0.618 |
BC_0510 | BC_5461 | BC_0510 | BC_5461 | Integral membrane protein. | Hypothetical membrane protein yycH. | 0.630 |
BC_0510 | mreD | BC_0510 | BC_4444 | Integral membrane protein. | Rod shape-determining protein mreD. | 0.713 |
BC_0511 | BC_0510 | BC_0511 | BC_0510 | Glutamate synthase [NADPH] large chain. | Integral membrane protein. | 0.524 |
BC_1197 | BC_0510 | BC_1197 | BC_0510 | IG hypothetical 17542; Belongs to the UPF0738 family. | Integral membrane protein. | 0.537 |
BC_1197 | BC_4580 | BC_1197 | BC_4580 | IG hypothetical 17542; Belongs to the UPF0738 family. | Replication initiation and membrane attachment protein. | 0.456 |
BC_1197 | BC_4690 | BC_1197 | BC_4690 | IG hypothetical 17542; Belongs to the UPF0738 family. | Hypothetical Cytosolic Protein; Belongs to the UPF0354 family. | 0.454 |
BC_3186 | BC_0027 | BC_3186 | BC_0027 | Hypothetical protein. | Hypothetical Cytosolic Protein. | 0.691 |
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