STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_0510Integral membrane protein. (362 aa)    
Predicted Functional Partners:
mreD
Rod shape-determining protein mreD.
  
    0.713
BC_5461
Hypothetical membrane protein yycH.
  
     0.630
BC_4937
Hypothetical protein; Belongs to the UPF0349 family.
  
    0.618
BC_4690
Hypothetical Cytosolic Protein; Belongs to the UPF0354 family.
  
    0.567
BC_0027
Hypothetical Cytosolic Protein.
  
     0.546
BC_4580
Replication initiation and membrane attachment protein.
  
    0.543
BC_1197
IG hypothetical 17542; Belongs to the UPF0738 family.
  
    0.537
BC_4677
General stress protein.
  
     0.534
BC_0511
Glutamate synthase [NADPH] large chain.
       0.524
BC_3186
Hypothetical protein.
  
    0.513
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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