STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_0871Multidrug resistance ABC transporter ATP-binding and permease protein. (541 aa)    
Predicted Functional Partners:
BC_0870
Multidrug resistance ABC transporter ATP-binding and permease protein.
 
 
0.943
BC_3679
Multidrug resistance ABC transporter ATP-binding and permease protein.
 
 
0.738
BC_0874
Cystine transport ATP-binding protein.
     
0.647
BC_2456
Peptide synthetase.
  
 
 0.530
BC_1357
ABC transporter ATP-binding protein.
  
 0.504
dnaK
Chaperone protein dnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.469
BC_4940
ABC transporter ATP-binding protein.
     
0.441
BC_1744
SWF/SNF family helicase.
    
 
 0.429
BC_2306
Glycine-AMP ligase.
  
 
 0.423
BC_2307
Glycine-AMP ligase.
  
 
 0.423
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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