Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BC_1024Glyoxalase family protein. (314 aa)    
Predicted Functional Partners:
BC_3642
Carboxylesterase.
   
 0.971
BC_1025
Glyoxalase family protein.
 
   
0.962
BC_3472
Hypothetical protein.
     
 0.912
BC_2315
DinB protein.
     
 0.902
BC_1937
Luciferase-like monooxygenase.
 
  
 0.900
BC_3437
Hypothetical Cytosolic Protein.
   
    0.877
BC_3438
Transcriptional regulator, PadR family.
   
    0.877
BC_4354
Glyoxalase family protein.
 
   
 0.743
BC_3532
Glyoxalase family protein.
 
   
 0.702
BC_1330
Hypothetical protein.
   
    0.695
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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