STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliNFlagellar motor switch protein fliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family. (119 aa)    
Predicted Functional Partners:
fliG
Flagellar motor switch protein fliG.
 
 0.999
fliM
Flagellar motor switch protein fliM; One of the proteins that forms a switch complex that is proposed to be located at the base of the basal body. This complex interacts with chemotaxis proteins (such as CheY) in addition to contacting components of the motor that determine the direction of flagellar rotation; Belongs to the FliM family.
 
 0.999
fliR
Flagellar biosynthetic protein fliR.
 
 
 0.997
FliP
Flagellar biosynthetic protein fliP.
 
  
 0.996
flgC
Flagellar basal-body rod protein flgC; Belongs to the flagella basal body rod proteins family.
 
 
 0.993
fliY
Chemotaxis protein cheC.
 
 0.990
FliQ
Flagellar biosynthetic protein fliQ.
 
  
 0.990
fliI
Flagellum-specific ATP synthase.
 
 
 0.988
flgK
Flagellar hook-associated protein 1.
 
 
 0.983
flhB
Flagellar biosynthetic protein flhB.
 
  
 0.983
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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