STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_1672Metal-dependent hydrolase related to alanyl-tRNA synthetase. (236 aa)    
Predicted Functional Partners:
BC_1673
Transcriptional regulator.
 
    0.801
BC_1675
Branched-chain amino acid transport protein azlD.
  
    0.763
BC_1674
Branched-chain amino acid transport protein azlC.
  
    0.761
flgG
Flagellar basal-body rod protein flgG.
       0.505
BC_1928
Branched-chain amino acid transport ATP-binding protein livG.
  
     0.475
hisS-1
Histidyl-tRNA synthetase.
 
 
 
 0.458
BC_1929
Branched-chain amino acid transport ATP-binding protein livF.
  
    0.431
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
Server load: low (40%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.