STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_1685ABC transporter substrate-binding protein. (341 aa)    
Predicted Functional Partners:
BC_1686
Zn-dependent hydrolase (beta-lactamase superfamily).
 
 
 0.998
BC_1684
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.994
BC_1325
2-aminoethylphosphonate transport system permease protein phnU.
 
 
 0.990
BC_1324
2-aminoethylphosphonate transport ATP-binding protein phnT; Belongs to the ABC transporter superfamily.
 
 
 0.967
BC_1323
2-aminoethylphosphonate-binding protein.
  
 
 
0.931
BC_5259
ABC transporter substrate-binding protein.
  
  
 
0.928
BC_1687
Hypothetical protein.
 
    0.847
BC_5258
Phosphoglycerate transporter protein.
  
  
 0.792
BC_0889
Coproporphyrinogen oxidase, anaerobic.
      
 0.674
BC_4315
Coproporphyrinogen oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.
      
 0.674
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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