STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_2004Hypothetical protein. (175 aa)    
Predicted Functional Partners:
BC_3581
Hypothetical protein.
   
    0.576
BC_2982
Fosfomycin resistance protein.
  
    0.573
BC_2075
Hypothetical protein.
  
    0.552
BC_2630
Molybdopterin biosynthesis MoeB protein.
  
    0.522
BC_4194
Hypothetical protein.
  
    0.511
BC_2003
Hypothetical protein.
       0.496
BC_0388
Hypothetical protein.
 
    0.487
BC_1944
Lipopolysaccharide biosynthesis protein; Belongs to the DegT/DnrJ/EryC1 family.
   
    0.470
rsgA
GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
  
    0.470
BC_2645
Ribosomal-protein-alanine acetyltransferase.
  
    0.469
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.