STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_2011Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase; Belongs to the Dps family. (147 aa)    
Predicted Functional Partners:
ahpC
Alkyl hydroperoxide reductase C22; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
  
 0.842
raiA
Probable Sigma (54) modulation protein / SSU ribosomal protein S30P; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.706
BC_5177
Trp repressor binding protein.
  
  
 0.690
aspA
Aspartate ammonia-lyase.
      
 0.660
aspA-3
Aspartate ammonia-lyase.
      
 0.660
BC_4475
Osmotically inducible protein C.
  
  
 0.634
BC_1285
Aldehyde dehydrogenase (NAD(P)+); Belongs to the aldehyde dehydrogenase family.
   
  
 0.606
BC_3555
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.606
BC_2832
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  
 0.605
aspA-2
Aspartate ammonia-lyase.
      
 0.593
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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