STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_2036Hypothetical Membrane Spanning Protein. (296 aa)    
Predicted Functional Partners:
BC_2037
Hypothetical Membrane Spanning Protein.
 
  
 0.976
BC_1707
Hypothetical Membrane Spanning Protein.
 
  
 0.854
BC_1830
Copper resistance protein A.
  
  
 0.585
BC_2042
Putative NAD-dependent dehydrogenase.
   
    0.576
BC_5054
Putative NAD-dependent dehydrogenase.
   
    0.576
BC_2035
Magnesium and cobalt transport protein corA.
 
    0.562
trmB
SAM-dependent methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
   
    0.523
BC_2038
Acyl-CoA hydrolase.
       0.512
BC_4456
Type I restriction-modification system restriction subunit.
 
    0.429
BC_4457
Type I restriction-modification system restriction subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
    0.425
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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