STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_2166Transcriptional regulator, TetR family. (194 aa)    
Predicted Functional Partners:
BC_2165
Hypothetical Membrane Spanning Protein.
 
    0.888
BC_4534
Hypothetical protein.
  
     0.576
BC_0477
Transcriptional regulator.
  
     0.545
BC_2513
Excinuclease ABC subunit A.
  
     0.499
BC_4749
ABC transporter permease protein.
 
     0.479
BC_4535
Bacitracin transport permease protein BCRB.
 
     0.478
BC_3073
Hypothetical protein.
  
     0.454
BC_3160
Transcriptional regulator, TetR family.
  
     0.453
BC_2780
Hypothetical protein.
  
     0.447
BC_2340
Transcriptional regulator, TetR family.
  
    0.405
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.