STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_2858Hypothetical protein. (87 aa)    
Predicted Functional Partners:
BC_2087
Hypothetical protein.
   
  
 0.599
BC_0860
Multidrug resistance protein B.
   
  
 0.598
BC_3025
Transcriptional regulator, MarR family.
   
  
 0.598
BC_0789
Glutamyl endopeptidase precursor; Belongs to the peptidase S1B family.
   
  
 0.594
BC_3414
Hydrolase.
   
  
 0.592
BC_4333
Putative lipase.
      
 0.592
BC_5381
Ferrichrome transport ATP-binding protein fhuC.
   
  
 0.592
BC_1844
Nitroreductase family protein.
   
  
 0.591
BC_3731
COP associated protein.
      
 0.591
BC_3732
Hypothetical Cytosolic Protein.
      
 0.591
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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