STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_2882Hypothetical Cytosolic Protein. (236 aa)    
Predicted Functional Partners:
BC_2883
Hypothetical Cytosolic Protein.
 
  
 0.989
BC_2881
Hypothetical Cytosolic Protein.
 
   
0.850
fliY
Chemotaxis protein cheC.
    
 
 0.758
BC_2880
Multidrug resistance protein B; Belongs to the major facilitator superfamily.
 
    0.647
BC_2884
Oligopeptide-binding protein oppA.
 
     0.525
BC_3879
Transporter.
  
     0.473
BC_3959
Hypothetical protein.
  
     0.419
BC_3111
Spore germination protein BB.
  
     0.414
sspH1
Small, acid-soluble spore protein; Belongs to the SspH family.
  
     0.410
BC_4372
Penicillin-binding protein.
 
     0.409
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.