Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BC_1809 | BC_3101 | Non-hemolytic enterotoxin lytic component L2. | Hemolysin BL binding component precursor. | 0.629 |
BC_1809 | BC_3103 | Non-hemolytic enterotoxin lytic component L2. | Hemolysin BL lytic component L1. | 0.876 |
BC_1809 | BC_3104 | Non-hemolytic enterotoxin lytic component L2. | Hemolysin BL lytic component L2. | 0.758 |
BC_1809 | BC_5101 | Non-hemolytic enterotoxin lytic component L2. | Perfringolysin O precursor; Sulfhydryl-activated toxin that causes cytolysis by forming pores in cholesterol containing host membranes. After binding to target membranes, the protein undergoes a major conformation change, leading to its insertion in the host membrane and formation of an oligomeric pore complex; Belongs to the thiol-activated cytolysin family. | 0.564 |
BC_3101 | BC_1809 | Hemolysin BL binding component precursor. | Non-hemolytic enterotoxin lytic component L2. | 0.629 |
BC_3101 | BC_3102 | Hemolysin BL binding component precursor. | Hemolysin BL binding component precursor. | 0.979 |
BC_3101 | BC_3103 | Hemolysin BL binding component precursor. | Hemolysin BL lytic component L1. | 0.978 |
BC_3101 | BC_3104 | Hemolysin BL binding component precursor. | Hemolysin BL lytic component L2. | 0.987 |
BC_3101 | BC_3383 | Hemolysin BL binding component precursor. | Bacillolysin; Extracellular zinc metalloprotease. | 0.463 |
BC_3101 | BC_5101 | Hemolysin BL binding component precursor. | Perfringolysin O precursor; Sulfhydryl-activated toxin that causes cytolysis by forming pores in cholesterol containing host membranes. After binding to target membranes, the protein undergoes a major conformation change, leading to its insertion in the host membrane and formation of an oligomeric pore complex; Belongs to the thiol-activated cytolysin family. | 0.546 |
BC_3102 | BC_3101 | Hemolysin BL binding component precursor. | Hemolysin BL binding component precursor. | 0.979 |
BC_3102 | BC_3103 | Hemolysin BL binding component precursor. | Hemolysin BL lytic component L1. | 0.996 |
BC_3102 | BC_3104 | Hemolysin BL binding component precursor. | Hemolysin BL lytic component L2. | 0.997 |
BC_3103 | BC_1809 | Hemolysin BL lytic component L1. | Non-hemolytic enterotoxin lytic component L2. | 0.876 |
BC_3103 | BC_3101 | Hemolysin BL lytic component L1. | Hemolysin BL binding component precursor. | 0.978 |
BC_3103 | BC_3102 | Hemolysin BL lytic component L1. | Hemolysin BL binding component precursor. | 0.996 |
BC_3103 | BC_3104 | Hemolysin BL lytic component L1. | Hemolysin BL lytic component L2. | 0.999 |
BC_3104 | BC_1809 | Hemolysin BL lytic component L2. | Non-hemolytic enterotoxin lytic component L2. | 0.758 |
BC_3104 | BC_3101 | Hemolysin BL lytic component L2. | Hemolysin BL binding component precursor. | 0.987 |
BC_3104 | BC_3102 | Hemolysin BL lytic component L2. | Hemolysin BL binding component precursor. | 0.997 |
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