STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_3427Glycosyltransferase. (253 aa)    
Predicted Functional Partners:
BC_1519
TPR-repeat-containing protein.
  
 
 0.717
BC_2163
TPR-repeat-containing protein.
  
 
 0.667
BC_0547
Sensory box/GGDEF family protein.
  
  
 0.620
BC_0601
Transcriptional activator NprR.
 
 
 0.591
BC_3428
Lysine exporter protein.
  
    0.536
BC_1366
SSEB protein.
  
 
 0.527
BC_2917
TPR-repeat-containing protein.
  
 
 0.527
BC_4390
Tetratricopeptide repeat family protein.
  
 
 0.527
BC_2466
Microbial collagenase.
 
    0.518
BC_5202
UDP-glucose 6-dehydrogenase.
 
  
 0.514
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.