Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_3497 | BC_3498 | BC_3497 | BC_3498 | Transcriptional regulator, ArsR family. | Quinone oxidoreductase. | 0.709 |
BC_3497 | BC_4708 | BC_3497 | BC_4708 | Transcriptional regulator, ArsR family. | Transcriptional regulator, ArsR family. | 0.419 |
BC_3497 | BC_4833 | BC_3497 | BC_4833 | Transcriptional regulator, ArsR family. | Hypothetical Membrane Spanning Protein; Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor/signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane. | 0.432 |
BC_3497 | selO | BC_3497 | BC_3499 | Transcriptional regulator, ArsR family. | Hypothetical Cytosolic Protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | 0.431 |
BC_3498 | BC_3497 | BC_3498 | BC_3497 | Quinone oxidoreductase. | Transcriptional regulator, ArsR family. | 0.709 |
BC_3498 | selO | BC_3498 | BC_3499 | Quinone oxidoreductase. | Hypothetical Cytosolic Protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | 0.457 |
BC_4708 | BC_3497 | BC_4708 | BC_3497 | Transcriptional regulator, ArsR family. | Transcriptional regulator, ArsR family. | 0.419 |
BC_4708 | BC_4833 | BC_4708 | BC_4833 | Transcriptional regulator, ArsR family. | Hypothetical Membrane Spanning Protein; Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor/signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane. | 0.856 |
BC_4833 | BC_3497 | BC_4833 | BC_3497 | Hypothetical Membrane Spanning Protein; Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor/signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane. | Transcriptional regulator, ArsR family. | 0.432 |
BC_4833 | BC_4708 | BC_4833 | BC_4708 | Hypothetical Membrane Spanning Protein; Immunity protein that provides protection for the cell against the toxic effects of SDP, its own SdpC-derived killing factor, and that functions as a receptor/signal transduction protein as well. Once SDP accumulates in the extracellular milieu, SdpI binds to SDP, causing sequestration of SdpR at the bacterial membrane. | Transcriptional regulator, ArsR family. | 0.856 |
selO | BC_3497 | BC_3499 | BC_3497 | Hypothetical Cytosolic Protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | Transcriptional regulator, ArsR family. | 0.431 |
selO | BC_3498 | BC_3499 | BC_3498 | Hypothetical Cytosolic Protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). | Quinone oxidoreductase. | 0.457 |