STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tlpThioredoxin related protein; Belongs to the Tlp family. (65 aa)    
Predicted Functional Partners:
sspN
Hypothetical protein; Belongs to the SspN family.
  
  
 0.950
spoIIIAB
Stage III sporulation protein AB.
  
  
 0.766
sspF
SspF protein; May play some important role in either sporulation or the dormant spore.
  
  
 0.734
yqfC
Hypothetical Cytosolic Protein.
   
  
 0.655
sspO
Spore coat protein K; Belongs to the SspO family.
  
  
 0.636
spoIIM
Stage II sporulation protein M; Required for complete septum migration and engulfment of the forespore compartment during sporulation. Required for stabilizing and recruiting of SpoIIP to the septal membrane.
  
  
 0.634
spoIIIAA
Stage III sporulation protein AA.
   
  
 0.628
sspP
Spore coat protein L; Belongs to the SspP family.
   
  
 0.622
bofA
SigmaK-factor processing regulatory protein BofA.
  
     0.594
BC_2099
Hypothetical protein.
  
    0.580
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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