STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_3645CcdC protein. (162 aa)    
Predicted Functional Partners:
BC_5225
Cytochrome d ubiquinol oxidase subunit II.
  
     0.608
BC_3646
Ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family.
 
     0.583
BC_3979
Cytochrome d ubiquinol oxidase subunit II.
  
    0.528
BC_4937
Hypothetical protein; Belongs to the UPF0349 family.
  
    0.526
BC_4569
Multidrug resistance protein A.
  
     0.484
BC_1288
Spermidine/putrescine transport system permease protein potC.
   
    0.411
putP-2
Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.407
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.