STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_3677N-acetylmuramoyl-L-alanine amidase. (348 aa)    
Predicted Functional Partners:
BC_2823
N-acetylmuramoyl-L-alanine amidase.
  
  
 0.562
BC_0888
N-acetylmuramoyl-L-alanine amidase.
     
 0.547
BC_1660
Soluble lytic murein transglycosylase.
  
  
 0.539
BC_4075
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
  
 0.525
BC_2448
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
  
 0.523
BC_5237
N-acetylglucosaminyltransferase.
      
 0.520
BC_2468
Cell elongation specific D,D-transpeptidase.
   
  
 0.517
BC_1469
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
   
  
 0.511
BC_2190
Penicillin-binding protein.
      
 0.509
BC_2688
Penicillin-binding protein.
      
 0.509
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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