Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
BC_3694 | BC_3695 | N-acetylmuramoyl-L-alanine amidase. | Holin. | 0.933 |
BC_3694 | BC_3696 | N-acetylmuramoyl-L-alanine amidase. | XpaF1 protein. | 0.779 |
BC_3694 | BC_3697 | N-acetylmuramoyl-L-alanine amidase. | Phage-related protein. | 0.590 |
BC_3695 | BC_3694 | Holin. | N-acetylmuramoyl-L-alanine amidase. | 0.933 |
BC_3695 | BC_3696 | Holin. | XpaF1 protein. | 0.782 |
BC_3695 | BC_3697 | Holin. | Phage-related protein. | 0.572 |
BC_3696 | BC_3694 | XpaF1 protein. | N-acetylmuramoyl-L-alanine amidase. | 0.779 |
BC_3696 | BC_3695 | XpaF1 protein. | Holin. | 0.782 |
BC_3696 | BC_3697 | XpaF1 protein. | Phage-related protein. | 0.610 |
BC_3697 | BC_3694 | Phage-related protein. | N-acetylmuramoyl-L-alanine amidase. | 0.590 |
BC_3697 | BC_3695 | Phage-related protein. | Holin. | 0.572 |
BC_3697 | BC_3696 | Phage-related protein. | XpaF1 protein. | 0.610 |