Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BC_1376 | BC_2304 | BC_1376 | BC_2304 | Flavodoxin. | 2,3-dihydroxybenzoate-AMP ligase. | 0.857 |
BC_1376 | BC_2305 | BC_1376 | BC_2305 | Flavodoxin. | Isochorismatase. | 0.883 |
BC_1376 | BC_3734 | BC_1376 | BC_3734 | Flavodoxin. | IroE protein. | 0.887 |
BC_1376 | BC_3735 | BC_1376 | BC_3735 | Flavodoxin. | Iron(III) dicitrate transport ATP-binding protein fecE. | 0.534 |
BC_1376 | BC_3736 | BC_1376 | BC_3736 | Flavodoxin. | Iron(III) dicitrate transport system permease protein fecC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.731 |
BC_1376 | BC_3737 | BC_1376 | BC_3737 | Flavodoxin. | Iron(III) dicitrate transport system permease protein fecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.752 |
BC_1376 | BC_3738 | BC_1376 | BC_3738 | Flavodoxin. | Iron(III) dicitrate-binding protein. | 0.802 |
BC_1376 | dhbA | BC_1376 | BC_2302 | Flavodoxin. | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.876 |
BC_1376 | dhbC | BC_1376 | BC_2303 | Flavodoxin. | Isochorismate synthase. | 0.900 |
BC_2304 | BC_1376 | BC_2304 | BC_1376 | 2,3-dihydroxybenzoate-AMP ligase. | Flavodoxin. | 0.857 |
BC_2304 | BC_2305 | BC_2304 | BC_2305 | 2,3-dihydroxybenzoate-AMP ligase. | Isochorismatase. | 0.999 |
BC_2304 | BC_2308 | BC_2304 | BC_2308 | 2,3-dihydroxybenzoate-AMP ligase. | Glycine-AMP ligase. | 0.997 |
BC_2304 | BC_3734 | BC_2304 | BC_3734 | 2,3-dihydroxybenzoate-AMP ligase. | IroE protein. | 0.952 |
BC_2304 | BC_3735 | BC_2304 | BC_3735 | 2,3-dihydroxybenzoate-AMP ligase. | Iron(III) dicitrate transport ATP-binding protein fecE. | 0.492 |
BC_2304 | BC_3736 | BC_2304 | BC_3736 | 2,3-dihydroxybenzoate-AMP ligase. | Iron(III) dicitrate transport system permease protein fecC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.523 |
BC_2304 | BC_3737 | BC_2304 | BC_3737 | 2,3-dihydroxybenzoate-AMP ligase. | Iron(III) dicitrate transport system permease protein fecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. | 0.517 |
BC_2304 | BC_3738 | BC_2304 | BC_3738 | 2,3-dihydroxybenzoate-AMP ligase. | Iron(III) dicitrate-binding protein. | 0.585 |
BC_2304 | dhbA | BC_2304 | BC_2302 | 2,3-dihydroxybenzoate-AMP ligase. | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.999 |
BC_2304 | dhbC | BC_2304 | BC_2303 | 2,3-dihydroxybenzoate-AMP ligase. | Isochorismate synthase. | 0.998 |
BC_2305 | BC_1376 | BC_2305 | BC_1376 | Isochorismatase. | Flavodoxin. | 0.883 |
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