STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ldhLeucine dehydrogenase; Catalyzes the reversible deamination of L-leucine to 4- methyl-2-oxopentanoate. (366 aa)    
Predicted Functional Partners:
BC_4159
2-oxoisovalerate dehydrogenase alpha subunit.
  
 
 0.998
BC_4158
2-oxoisovalerate dehydrogenase beta subunit.
  
 
 0.996
yqiS
Phosphate butyryltransferase.
 
  
 0.993
buk
Branched-chain-fatty-acid kinase; Belongs to the acetokinase family.
 
  
 0.988
BC_0511
Glutamate synthase [NADPH] large chain.
  
 
 0.984
lpdA-3
Dihydrolipoamide dehydrogenase.
  
  
 0.972
BC_4157
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex.
  
  
 0.965
ilvE-2
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.963
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
  
 
 0.959
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
   
 0.924
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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