STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_4206Transcriptional regulator, PadR family. (105 aa)    
Predicted Functional Partners:
BC_4207
Hypothetical protein.
 
  
 0.989
splB
Spore photoproduct lyase.
     
 0.839
BC_4028
Hypothetical Membrane Spanning Protein.
 
  
 0.798
BC_1439
Two-component response regulator yvqC.
   
  
 0.777
BC_4203
Phosphoglycolate phosphatase.
  
  
 0.729
BC_4742
ABC transporter permease protein.
     
 0.728
mntR
Manganese transport transcription regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.
  
  
 0.691
BC_4210
Rhodanese-related sulfurtransferases.
  
  
 0.609
BC_1612
Na+/H+ antiporter NapA (inosine-dependent germination); Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
  
 0.602
BC_4211
Transcriptional regulator, LacI family.
   
  
 0.600
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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