STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BC_4340NAD(P)H nitroreductase. (208 aa)    
Predicted Functional Partners:
birA
Biotin operon repressor / Biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
  
    0.668
BC_3643
Glyoxalase family protein.
  
  
 0.516
BC_1736
Export ABC transporter permease protein.
  
  
 0.504
BC_5354
ABC transporter permease protein.
  
  
 0.504
rpmG2
LSU ribosomal protein L33P; Belongs to the bacterial ribosomal protein bL33 family.
       0.447
BC_4341
GTP pyrophosphokinase.
     
 0.426
BC_1024
Glyoxalase family protein.
  
  
 0.412
BC_5122
Hypothetical Cytosolic Protein.
  
  
 0.402
Your Current Organism:
Bacillus cereus ATCC 14579
NCBI taxonomy Id: 226900
Other names: B. cereus ATCC 14579, Bacillus cereus (strain ATCC 14579 / DSM 31)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.